Amplify  
   Program for designing, analyzing, and simulating PCR experiments.
   http://bip.weizmann.ac.il/mb/bioguide/pcr/PCRsofAmplify.html

PrimerDesign  
   A DOS-program to choose primer for PCR or oligonucleotide probes.
   http://www.chemie.uni-marburg.de/~becker/pdhome.html

Xprimer  
   A tool for selection of PCR primers.
   http://alces.med.umn.edu/xprimerinfo.html

PCR Box Titration Calculator  
   JavaScript program calculates the amounts of ingredients needed to do two-dimensional box titrations of various reactants in polmerase chain reactions.
   http://www.attotron.com/pub/pcrtitr.htm

Programs for designing PCR primers  
   List of links, from the Weizmann Institute, Rehovot, Israel.
   http://bip.weizmann.ac.il/mb/bioguide/pcr/software.html

Primer  
   Program to help finding potential mispriming sites in PCR.
   http://bip.weizmann.ac.il/mb/bioguide/pcr/PCRsofPrimerStanford.html

Perceptive Instruments  
   An advanced image analysis system for the quantification of DNA damage in cells using the Comet single cell gel electrophoresis technique.
   http://www.perceptive.co.uk/applications/comet.htm

JaMBW  
   Java based Molecular Biologist's Workbench by Luca I.G.Toldo.
   http://www.bioinformatics.org/JaMBW/

PCR primer selection  
   Program designed for selection of PCR primers to amplify precise regions from relatively low complexity genomes.
   http://alces.med.umn.edu/websub.html

PC-Rare  
   Software that allows the choice of specific PCR primers.
   http://bip.weizmann.ac.il/mb/bioguide/pcr/PCRsofPC_Rare.html

Primer3  
   Program to pick primers from a DNA sequence.
   http://www.broad.mit.edu/cgi-bin/primer/primer3_www.cgi

PrimerGen  
   Program that searches strings of amino acid residues in order to reverse-translate oligonucletide primers of a desired range of lengths and maximum number of degeneracies.
   http://bip.weizmann.ac.il/mb/bioguide/pcr/PCRsofPrimerGen.html

Electronic PCR  
   A program that checks sequence(s) submitted by the visitor against known sequences. Program set up and run by the US National Institute of Health.
   http://www.ncbi.nih.gov/genome/sts/epcr.cgi/

In silico PCR  
   Tools to derive the theoretical results from many PCR techniques and techniques related to PCR, from the Department of Immunology, Microbiology and Parasitology, Faculty of Pharmacy at the University of the Basque Country, Spain.
   http://www.in-silico.com

TGGE-STAR  
   A program to optimize temperature gradient gel electrophoresis and PCR for mutation screening.
   http://www.charite.de/bioinf/tgge/