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Software (59)

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GRASP Open in a new browser window  
   Display molecules and molecular surfaces, optionally representing a field (for example electrostatic) as local colors. Silicon Graphics (IRIX) platform.
   http://trantor.bioc.columbia.edu/grasp/
CCP4 Open in a new browser window  
   Comprehensive computing suite for protein crystallography. VMS and Unix platforms.
   http://www.dl.ac.uk/CCP/CCP4/main.html
O Open in a new browser window  
   Directory of information for users of the "O" crystallographic package to model, display and build macromolecules. Silicon Graphics (IRIX) and Linux platform.
   http://imsb.au.dk/~mok/o/
PROCHECK Open in a new browser window  
   Protein structure validation program. Unix platform.
   http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html
SINCRIS Open in a new browser window  
   Database of software for crystallography.
   http://www.lmcp.jussieu.fr/sincris/logiciel/#liste
Uppsala Software Factory Open in a new browser window  
   Software for macromolecular crystallography and structural biology. Many of these programs collaborate with "O" (see there).
   http://alpha2.bmc.uu.se/~gerard/manuals/
SnB Open in a new browser window  
   A computer program based on Shake-and-Bake, a dual-space direct-methods procedure for determining crystal structures from X-ray diffraction data.
   http://www.hwi.buffalo.edu/SnB/
Crystal Studio Open in a new browser window  
   Display and manipulation of crystal structures and simulation of diffraction patterns. Windows 95/98/NT platform.
   http://www.crystalsoftcorp.com/CrystalStudio/
Jana2000 Open in a new browser window  
   System for solving and refinement of regular, modulated and composite structures from monocrystal and powder diffraction data.
   http://www-xray.fzu.cz/jana/jana.html
Diamond - Visual Crystal Structure Information System Open in a new browser window  
   an MS Windows application for the exploration and drawing of crystal structures.
   http://www.crystalimpact.com/diamond
PLATON Open in a new browser window  
   A versatile crystallographic program implementing a large variety of standard geometrical calculations, tests, utilities, graphics and several filters. Unix and Windows platforms.
   http://www.cryst.chem.uu.nl/platon/
HKL Open in a new browser window  
   The triad of Denzo, XDisplayF and Scalepack: programs to visualize and interpret X-ray diffraction images.
   http://www.hkl-xray.com/
LaboTex - The Texture Analysis Software for Windows (95/98/NT) Open in a new browser window  
   Qualitative and quantitative analysis of crystallographic textures. ODF calculation using both types of experimental data : pole figures (X-Ray,neutrons) or sets of individual orientations (EBSD,model calculations).
   http://www.labosoft.com.pl/ver20.htm
CrystalDesigner Open in a new browser window  
   Tool for building, studying and visualizing all kinds of crystal structures. MacOS platform.
   http://www.crystaldesigner.no/
CrystalMaker Software Open in a new browser window  
   Real-time photo-realistic crystal structures program for Macintosh. Download a demo version - plus our free diffraction software and QuickTime VR movies.
   http://www.crystalmaker.co.uk/
Crystals Open in a new browser window  
   software package for single crystal X-ray structure refinement and analysis consists of CRYSTALS, Cameron and specially recompiled versions of SIR92 and SHELXS.
   http://www.xtl.ox.ac.uk/crystals.html
AutoDock Open in a new browser window  
   AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.
   http://www.scripps.edu/pub/olson-web/doc/autodock/
CCP14 Homepage - Single Crystal and Powder Diffraction Open in a new browser window  
   Freely available crystallographic software for Academia
   http://www.ccp14.ac.uk/
SPEC / Certified Scientific Software Open in a new browser window  
   a UNIX-based software package for instrument control and data acquisition used for X-ray diffraction at synchrotrons and in university, national and industrial laboratories.
   http://www.certif.com/
CaRIne Crystallography Open in a new browser window  
   CaRIne is used for teaching crystallography and for research in materials science, chemistry and earth sciences. It brings real lattices, X-Ray diffraction diagrams, reciprocal lattices and stereographic projections all at the same time in a multi-windowe
   http://pro.wanadoo.fr/carine.crystallography/
The Richardsons' 3D Protein Structure Laboratory and Kinemage Homepage Open in a new browser window  
   Software and methods source for molecular model visualization (Mage, JavaMage, Prekin); model validation via all-atom contact analysis (Probe, Reduce, MolProbity) and utility (Kincontour, Dang, Cluster, Bndlst, Atvol). Amino acid rotamers database for m
   http://kinemage.biochem.duke.edu
ESPOIR Open in a new browser window  
   Open source software for solving crystal structures from powder diffraction data (or single crystal data) by Monte Carlo methods.
   http://www.cristal.org/sdpd/espoir/
KPLOT Open in a new browser window  
   Multi-purpose tool for crystal structure visualization and analysis, free download, available for Windows and Linux
   http://www.crystalimpact.de/kplot.htm
UMWEG and PSILAM Open in a new browser window  
   Programs for calculation and graphical representation of multiple diffraction patterns.
   http://www.rrz.uni-hamburg.de/mpi/rossmanith/frame.html
WinGX Open in a new browser window  
   System of programs for solving, refining and analysing single crystal X-ray diffraction data for small molecules. Provides a consistent and user-friendly GUI for some of the best publicly-available crystallographic programs. Interfaces to other popular pr
   http://www.chem.gla.ac.uk/~louis/software/wingx
ARITVE Open in a new browser window  
   Modelling amorphous structures by a Rietveld-type refinement of the atomic coordinates. Windows 9x/NT platform.
   http://www.cristal.org/aritve.html
CAOS Open in a new browser window  
   A crystallographic package for crystal structure determination from single crystal diffraction data.
   http://www.ccp14.ac.uk/ccp/web-mirrors/caos/isc/caos/
TOPXD Open in a new browser window  
   Topological analysis program for experimental static electron density based on Hansen-Coppens multipole formalism.
   http://harker.chem.buffalo.edu/public/topxd/
EUHEDRAL Open in a new browser window  
   Refinement of crystal shape against the intensities of multiple measured reflections coming from redundant area detector data for an analytical absorption correction. Needs the PLATON package.
   http://www.crystal.chem.uu.nl/distr/euhedral/
SHELX-97 Open in a new browser window  
   Set of programs for crystal structure determination from single-crystal diffraction data. Runs on all systems including DOS.
   http://shelx.uni-ac.gwdg.de/SHELX/
Amira Open in a new browser window  
   An advanced 3D visualization and modeling system, especially useful for displaying 3D image data and simulation results. Powerful segmentation tools and automatic geometry reconstruction help to generate surface models (e.g. VRML) from 3D image data.
   http://www.amiravis.com/
FOX Open in a new browser window  
   A free, open-source program for the global optimization of crystal structures from powder diffraction data.
   http://objcryst.sourceforge.net/Fox/
Endeavour Open in a new browser window  
   designed for the solution of crystal structures from powder diffraction data. Its concept implies a combined global optimization of the difference between the calculated and measured diffraction pattern and of the potential energy of the system.
   http://www.crystalimpact.com/endeavour
Crystal Web Open in a new browser window  
   a Java applet that displays d-spacings for given mineral data. New minerals can be added if the appropriate crystallographic data are supplied. A full-fledged Java application (Crystal Clear) with more options may also be downloaded.
   http://www.public.asu.edu/~bdegreg/crystalweb.htm
fityk - software for fitting peaks Open in a new browser window  
   Fityk is a general-purpose data fitting program. It is being developed to analyze powder diffraction patterns, but it can be used to fit analytical (especially peak-shaped) functions to any kind of data.
   http://www.unipress.waw.pl/~wojdyr/fityk/
Crystallographic Computer Programs by M. Nardelli Open in a new browser window  
   Several programs used in the analysis and handling of diffraction data and atomic parameters from molecular compounds. Fortran sources and binaries for DOS and Silicon Graphics.
   http://www.unipr.it/~nardelli/software.html
PATSEE Open in a new browser window  
   Program for location of a fragment of known geometry by integrated Patterson, packing, and direct methods.
   http://www.chemie.uni-frankfurt.de/egert/html/patsee.html
PCMolecule2 and MacMolecule2 Open in a new browser window  
   Software for molecular visualization in biology, chemistry and biochemistry education. MacOS and Windows platforms.
   http://www.blc.arizona.edu/linus/linus.html
Queen of Spades Open in a new browser window  
   Implementation of a Molecular Replacement method which simultaneously determines the rotational and translational parameters of all copies of a search model in the crystallographic asymmetric unit of a target structure. Unix, VMS and Windows platforms.
   http://origin.imbb.forth.gr/~glykos/Qs.html
RAD, FIT, PEDX, IFO Open in a new browser window  
   RAD - program for analysis of X-ray diffraction data from amorphous materials. FIT - program for decomposition of powder diffraction patterns and profile analysis of pair correlation functions. PEDX - program for radial-distribution-function analysis of
   http://www.pa.msu.edu/~petkov/software.html
GSAS Open in a new browser window  
   Set of programs for the processing and analysis of both single crystal and powder diffraction data.
   http://www.ncnr.nist.gov/programs/crystallography/software/gsas.html
Datasqueeze Software Open in a new browser window  
   A graphical interface for analyzing data from 2D X-ray diffraction detectors (wire, image plate, CCD). Particularly useful for the analysis of powder diffraction data, diffuse scattering from polymers or liquid crystals, or small-angle scattering from col
   http://www.datasqueezesoftware.com
enCIFer Open in a new browser window  
   Intuitive, user-friendly graphical program for CIF checking, editing and visualisation. Windows, Linux and Solaris platform.
   http://www.ccdc.cam.ac.uk/prods/encifer/
LCC Soft Open in a new browser window  
   Processing of X-Ray crystallographic data. Window based user interface, which allows easy navigation between program controls and fast reading of program output. Windows 2000/XP platform.
   http://www.lccsoft.org/
Xtal Open in a new browser window  
   A package of over sixty programs for calculations ranging from the reduction of raw diffraction intensities, to the solution, refinement and publication of crystal structures. These are applicable to X-ray, neutron and electron diffraction analyses, inclu
   http://xtal.sourceforge.net/
SIR97 Open in a new browser window  
   Integrated package of computer programs for the solution and refinement of crystal structures using single crystal data. Unix and Windows platform.
   http://www.ic.cnr.it/
TOPOS Open in a new browser window  
   A program package for multipurpose geometrical and topological analysis of crystal structures. It works with crystal structure databases.
   http://www.topos.ssu.samara.ru/
ORTEP-III Open in a new browser window  
   The Oak Ridge Thermal Ellipsoid Plot (ORTEP) program is a computer program, written in Fortran, for drawing crystal structure illustrations.
   http://www.ornl.gov/sci/ortep/
Bond Valence Wizard Open in a new browser window  
   The program for prediction of interatomic distances in a crystal structure.
   http://marie.epfl.ch/orlov/bondval/
XAct Open in a new browser window  
   An application that can be used to construct, maintain, and record the results of many crystallisation experiments.
   http://zombie.imsb.au.dk/xact/
ScanOrient Open in a new browser window  
   Research and education tool for quickly orientating and indexing back-reflection Laue patterns from Polaroid films. Windows platform.
   http://www.multiwire.com/ScanOrient.html
Mercury Open in a new browser window  
   Offers a comprehensive range of tools for structure visualisation and the exploration of crystal packing. Free download, available for Windows, AIX, IRIX, Linux and Solaris.
   http://www.ccdc.cam.ac.uk/products/csd_system/mercury/
RPluto Open in a new browser window  
   An X-windows tool for visualising molecular crystal structures on UNIX (including Linux) platforms.
   http://www.ccdc.cam.ac.uk/free_services/rpluto/
SHARP Open in a new browser window  
   A computer program for refining a model of isomorphous heavy-atom substitution and calculating phase probabilities from it. Irix and Linux platforms.
   http://www.globalphasing.com/sharp/
BUSTER-TNT Open in a new browser window  
   A software system for crystallographic structure determination by Bayesian statistical methods. Irix and Linux platforms.
   http://www.globalphasing.com/buster/
PowDLL Open in a new browser window  
   A .NET dynamic link library used for the interconversion procedure between variable formats of Powder X-Ray files. The DLL is capable of handling 14 file formats (binary and ASCII).
   http://users.uoi.gr/nkourkou/
DIRDIF Open in a new browser window  
   A computer program system for crystal structure determination by Patterson methods and direct methods applied to difference structure factors.
   http://www.xtal.sci.ru.nl/dirdif/software/dirdif.html
Kcristal Open in a new browser window  
   A live-CD of the GNU/Linux mounted with the importants programs of crystallography for the powder methods.
   http://labcacc.iq.unesp.br/kcristal/
Crystal Plane Spacings and Interplanar Angles Open in a new browser window  
   Calculates crystal plane d-spacings and angles between Miller planes based on unit cell dimensions.
   http://www.public.asu.edu/~bdegreg/Xtalplanes.html

Last Updated: 2004-12-08 15:10:22


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